I cannot recommend to do that, because you EM simulate something that you can't build. The MLSC mode automatically creates a "2D sheet" via at the end of the MLSC. If that connection is missing in your result, you forgot to map that layer (default: "hole") as a via in the Momentum stackup.
I disagree. Momentum is meant to provide a physical result that is based on the actual layout, and should not introduce ideal connection from schematic.
When used properly, Momentum will include the short. You just missed to include the via layer ("hole") in your Momentum stackup.
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