Thanks to Dr.Volker,I solve the off grid error.The method is as follows after setting the cell sizes to 0.01um.
"From the user interface, you can set a cell size and force all points to snap to the cell size.
Edit > Select all
Modify > Snap to > x,y
but there might still be some precision problems in the file afterwards.
The reason:
Internally, Sonnet is using floating numbers to represent the coordinates, so some rounding issues might happen.
Sonnet made some changes in that area, so that you should see less problems with the latest version (13.56/14.x)
To see if your Sonnet project has rounding problems, you can open the *.son project file in a text editor
and check the polygon coordinates for something like .9999 that indicates precision problems."
But Still I am getting skew edge errors in the DRC run.Does anyone know how to solve it?