Hi,
First of all, please read the HFSS documentation:
Technical notes -> Excitationt -> Wave Ports
where you will understand why one may need to enforcement an integration line to a wave port.
Modes are being said degenerate when they have the same cutoff frequency (thus, exciting one mode will excite the other mode).
Then, please read more about circular waveguide, and look in the search engine of this forum. I found for example :
"Generally, most EM software produce a warning in case you have a port which support degenerate modes or multiple modes.
You can separate multiple modes to multiple ports by modifying the number of modes and you can separate degenerate modes by expliciting the mode polarization."
In a circular waveguide, the fundamental mode is TE11. But there is many possible field orientation (and two orthogonal). So you must define your modes orientations using integration lines.
Best regards,